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[ Module Hierarchy | Class Hierarchy ]

# Module Hierarchy

- core
  - core.AnalyseMapping: This script is used to evalulate the mapping results
  - core.FindOrfs: FindOrfs, Created 2012
  - core.InsertMutations: Created 2012 core Script for the generation of the artificial reference genome
  - core.PlotData: Created 2012
  - core.Prep: Created 2012
  - core.ReadAndWrite: Created 2012
- arden_analyze (script): Created on Thu Aug 18 2012
- arden_create (script): Created 2012 Main script for generating an artificial reference genome.
- arden_filter (script): Script for filtering alignments with deficient properties (rqs,gaps, mismatches).